PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Psi002159
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family GeBP
Protein Properties Length: 367aa    MW: 41364.4 Da    PI: 9.3705
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Picea_sitchensis-10635PU_refplantGDBView CDS
gnl|UG|Psi#S41647813PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57348.72.1e-15114209497
     DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsk.sqlveKirrLKkKfkkkvkk....aksgkepsfskehdqkifelskkiWg 97 
                 + ws eDei++   l+ ++ + g   + d+ afye+vk+ i +++++ +ql +K+r ++ +f   ++k       +++++ ++ h+   f++ k+iWg
  Psi002159 114 PQTWSAEDEISFVNTLLACAGEGG---QVDTAAFYEQVKETIALNITRnTQLYDKMRTMRSRFWSIQSKlkegNIAEDQFAYRSLHEAALFKVWKQIWG 209
                578****************77777...67****************98626***************99994333334567888999*************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.5E-17115209IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MSADRHSNGS PEDPNEMSAR PNSSHSQKKN NGVEAKRSMR NQGKDQLTPT AAKRSKPSTG  60
SGKKSQNNVE ELVAQTYAKG ISILHQKHKD DDARGSKSKK KKKAGKSSVQ TKIPQTWSAE  120
DEISFVNTLL ACAGEGGQVD TAAFYEQVKE TIALNITRNT QLYDKMRTMR SRFWSIQSKL  180
KEGNIAEDQF AYRSLHEAAL FKVWKQIWGN DVEKRDEEED GDNKDQLPSQ NNGNFVRDEN  240
HRANESRVPV VENMTEEVQS KVETLIDSLI RRISTATNLP PFSPGFGAEI GTGSCLCSNL  300
SRRMKELIEA VRSVKEFPGL GAVEAQALRQ KWRNHRLEEL RVFCRSLELL QEECALCLQE  360
LEKRKVK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Psi.31430.0shoot
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NZ240.0A9NZ24_PICSI; Putative uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.28e-10DNA-binding storekeeper protein-related transcriptional regulator